Microarray Image and Data Analysis

Preface Editor Contributors Introduction to Microarrays Luis Rueda and Adnan Ali Biological Aspects: Types and Applications of Microarrays Adnan Ali Gridding Methods for DNA Microarray Images Iman Rezaeian and Luis Rueda Machine Learning-Based DNA Microarray Image Gridding Dimitris Bariamis, Michalis Savelonas, and Dimitris Maroulis Non-Statistical Segmentation Methods for DNA Microarray Images Shahram Shirani Statistical Segmentation Methods for DNA Microarray Images Meng-Yuan Tsai, Tai-Been Chen, and Henry Horng-Shing Lu Microarray Image Restoration and Noise Filtering Rastislav Lukac Compression of DNA Microarray Images Miguel Hernandez-Cabronero, Michael W. Marcellin, and Joan Serra-Sagrist`a Image Processing of Affymetrix Microarrays Jose Manuel Arteaga-Salas Treatment of Noise and Artifacts in Affymetrix Arrays Caroline C. Friedel Quality Control and Analysis Algorithms for Tissue Microarrays as Biomarker Validation Tools Todd H. Stokes, Sonal Kothari, Chih-wen Cheng, and May D. Wang CNV-Interactome-Transcriptome Integration to Detect Driver Genes in Cancerology Maxime Garcia, Raphaele Millat-Carus, Francois Bertucci, Pascal Finetti, Arnaud Guille, Jose Adelaide, Ismahane Bekhouche, Renaud Sabatier, Max Chaffanet, Daniel Birnbaum, and Ghislain Bidaut Mining Gene-Sample-Time Microarray Data Yifeng Li and Alioune Ngom Systematic and Stochastic Biclustering Algorithms for Microarray Data Analysis Wassim Ayadi, Mourad Elloumi, and Jin-Kao Hao Reconstruction of Regulatory Networks from Microarray Data Yiqian Zhou, Rehman Qureshi, Francis Bell, and Ahmet Sacan Multidimensional Visualization of Microarray Data Ur ska Cvek and Marjan Trutschl Bioconductor Tools for Microarray Data Analysis Simon Cockell, Matthew Bashton, and Colin S. Gillespie Index